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TDS on Salary: How Employers Should Calculate and Deposit It

Oct 17, 2026  •  3 min read

TDS on salary is not a monthly calculation on monthly income. It is an annual tax estimate, divided by the months remaining, and revised whenever the estimate changes. Treating it as a monthly computation is the root of most year-end surprises.

The basic method

  1. Project the employee's total annual salary income
  2. Apply the chosen tax regime
  3. Deduct eligible exemptions and deductions (old regime) or the standard deduction (new regime)
  4. Compute tax on the resulting taxable income, add 4% health and education cess
  5. Subtract TDS already deducted this financial year
  6. Divide the balance by the months remaining
💡 Why this matters Because it is a projection, a mid-year bonus or salary revision changes the whole year's liability, not just that month's. Recalculate the projection on every change.

Old regime versus new regime

Employees choose. Your payroll must support both and let them switch at declaration time.

  • New regime — lower slab rates, standard deduction available, but most exemptions (HRA, LTA, 80C and so on) are unavailable. Simpler, and better for employees without significant deductions.
  • Old regime — higher rates offset by HRA, LTA, 80C, 80D, home loan interest and more. Better for employees with rent, home loans and investments.

The new regime is the default if the employee makes no declaration. Collect declarations early and in writing.

Handling employee declarations

At the start of the financial year, collect intended investments and exemptions. At year end, collect proof.

  • April–May — collect declarations, begin deducting on that basis
  • December–January — collect actual proof: rent receipts, insurance premiums, 80C evidence, home loan certificates
  • February–March — recompute on actuals and true up the remaining deductions
⚠️ The year-end crunch If an employee declared ₹1.5 lakh of 80C in April and produces nothing in January, their entire year's shortfall must be recovered in February and March. That can wipe out most of two months' take-home. Warn employees of this explicitly when you collect declarations — it is the single most common payroll grievance of the year.

HRA exemption calculation

Under the old regime, HRA exemption is the least of:

  • Actual HRA received
  • Rent paid minus 10% of basic salary
  • 50% of basic (Delhi, Mumbai, Kolkata, Chennai) or 40% of basic (elsewhere)

Rent above ₹1,00,000 per year requires the landlord's PAN. Without it, you cannot allow the exemption.

Deposit and filing

  • Deposit — by the 7th of the following month (April–February). For March, by 30 April.
  • Form 24Q — quarterly return: 31 July, 31 October, 31 January, and 31 May for Q4
  • Form 16 — issue to employees by 15 June following the financial year

Late deposit attracts 1.5% interest per month. Late filing attracts ₹200 per day under section 234E. Both are avoidable with a calendar reminder.

Common errors

  • Not recalculating the projection after a salary revision or bonus
  • Allowing declared deductions without collecting proof
  • Missing the landlord PAN requirement on high rent
  • Incorrect or missing PAN, which triggers deduction at 20%
  • Ignoring income the employee reports from a previous employer in the same year
  • Failing to account for perquisites — company car, accommodation, interest-free loans
✅ What good automation does here A capable payroll system recomputes the annual projection automatically on every salary event, flags employees whose declared deductions lack proof as the year closes, and generates Form 24Q and Form 16 from the same data. That removes the two biggest risks: stale projections and year-end manual reconciliation.
📝 Final note Send every employee a mid-year TDS projection statement showing their estimated annual tax and what proof you still need. A five-minute automated email in November prevents a great deal of anger in February.