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Form 16: What Employers Must Know Before the June Deadline

Oct 23, 2026  •  4 min read

Form 16 is the certificate of tax deducted at source on salary. For employees it is the primary document for filing returns. For employers it is a statutory obligation with a hard deadline and a per-day penalty.

Part A and Part B

Form 16 has two parts, generated differently:

  • Part A — generated and digitally signed from the TRACES portal. Contains employer and employee details, PAN and TAN, the assessment year, employment period, and a quarterly summary of tax deducted and deposited. You cannot type this yourself; it comes from your filed TDS returns.
  • Part B — an annexure prepared by the employer. Contains the detailed salary breakdown, exemptions claimed, deductions under Chapter VI-A, total taxable income and tax computed.
💡 Why Part A cannot be edited Part A is generated from the data in your filed Form 24Q returns. If something is wrong in Part A, the fix is a correction return, not an edited PDF. This is also why Part A will not generate at all if your returns have not been filed and processed.

The deadline and the penalty

  • Issue by 15 June following the end of the financial year
  • Penalty: ₹100 per day per certificate under section 272A(2)(g), until issued

For a 200-person company a month late, that is ₹6,00,000 of entirely avoidable exposure.

The sequence you must follow

Form 16 depends on upstream steps, so working backwards from 15 June:

  1. Deposit all TDS, including March, by 30 April
  2. File Q4 Form 24Q by 31 May
  3. Wait for TRACES to process the return
  4. Download Part A from TRACES
  5. Generate Part B from payroll
  6. Merge, sign and distribute by 15 June
⚠️ The common trap Employers who file Q4 on the 31 May deadline often find TRACES has not processed the return in time to download Part A and still distribute by 15 June. File Q4 in mid-May, not on the last day.

Awkward cases

Employees who joined mid-year. You issue Form 16 for the period they worked with you. If they gave you their previous employer's income details and you accounted for them in TDS, your Part B reflects total income; if not, the employee reconciles both certificates at filing. Either way, ask new joiners for Form 12B.

Employees who left mid-year. You still owe them a Form 16 for their period of employment, by 15 June. Collect a personal email address at exit — leavers routinely lose access to work email and then cannot file.

Employees with no TDS deducted. Strictly, Form 16 is required where tax was deducted. Many employers issue it regardless, because employees find it useful as proof of income. Issuing it is good practice.

Corrections. If Part B has an error, reissue the corrected Part B. If Part A is wrong, file a correction return in Form 24Q, wait for processing, then download and reissue.

Before you distribute, check

  • PAN of each employee matches their records exactly — a wrong PAN means the credit does not reach them
  • Employment period dates are right, especially for joiners and leavers
  • The tax deducted in Part A reconciles to your payroll register
  • Part B totals match Part A quarterly totals
  • The regime applied matches the employee's declaration
  • Deductions shown are the ones for which you actually received proof
✅ Reducing the June scramble A payroll system that holds the full year of salary, declaration and TDS data generates Part B for the whole workforce in one run and merges it with downloaded Part A files automatically. The manual version of this job is where errors and delays come from.
📝 Final note Distribute through self-service rather than email attachments where you can. Employees can retrieve past years themselves, and you stop fielding "please resend my Form 16" requests every July.